Type Members

1.  trait FeatureSet [T <: Feature] extends AnyRef

   A data structure storing a set of Features.

   A data structure storing a set of Features.

   Supports common operations on collections of genomic features, such as extracting overlappers of a given locus, and some common collection operations such as contains.

   T

   The type of Features contained in the set

2.  final class GTF22FeatureSet extends FeatureSet[Feature]

   A FeatureSet constructed from annotations specified in a GTF2.2 file.

   A FeatureSet constructed from annotations specified in a GTF2.2 file.

   GTF2.2 feature.format specification. See GTF22Record for details on how GTF2.2 records are interpreted and incorporated into Features.